1 / 5
Best for remote lagoon retreat
9.915 reviews
Fundu Lagoon
A secluded lagoon-side resort; check transfer and boat arrangements before booking.
- South-west Pemba
- remote lagoon retreat
From$796per room / nightSee live prices
5 Best Hotels on Pemba Island
Compare five Pemba Island hotels and lodges, from remote Fundu Lagoon to north-coast resorts and a small southern bay retreat.
Compare 5 places to stay
Compare location, stay style and Booking.com guest feedback. Select a hotel to jump to its profile.
| Hotel | Best for | Area | Booking guest score | Reviews | Price (USD) | Availability |
|---|---|---|---|---|---|---|
| Fundu Lagoon | remote lagoon retreat | South-west Pemba | 9.9 / 10 | 15 | From $796per room / night | See live prices ↗ |
| The Aiyana Resort & Spa | north-coast luxury | Makangale / north Pemba | 9.7 / 10 | 78 | From $634per room / night | See live prices ↗ |
| Emerald Bay Resort | small bay-side retreat | Chokocho / south Pemba | 8.9 / 10 | 42 | From $270per room / night | See live prices ↗ |
| Pemba Paradise | north-coast beach base | Makangale / north Pemba | 8.3 / 10 | 72 | From $181per room / night | See live prices ↗ |
| Pemba Eco Lodge | low-key eco stay | Shamiani Island / south Pemba | 8.3 / 10 | 57 | From $138per room / night | See live prices ↗ |
The shortlist
5 Best Hotels on Pemba Island
Pemba is quieter and more spread out than Unguja. Check the airport transfer, boat connection and exact beach conditions before choosing from this shortlist.
1 / 5
Best for north-coast luxury
9.778 reviews
The Aiyana Resort & Spa
A spacious beachfront resort for a quieter, higher-end island stay.
- Makangale / north Pemba
- north-coast luxury
From$634per room / nightSee live prices
1 / 5
Best for small bay-side retreat
8.942 reviews
Emerald Bay Resort
A small resort overlooking a sheltered bay in southern Pemba.
- Chokocho / south Pemba
- small bay-side retreat
From$270per room / nightSee live prices
1 / 5
Best for north-coast beach base
8.372 reviews
Pemba Paradise
A beach resort in northern Pemba with pool and gardens.
- Makangale / north Pemba
- north-coast beach base
From$181per room / nightSee live prices
1 / 5
Best for low-key eco stay
8.357 reviews
Pemba Eco Lodge
A small, nature-focused lodge on Shamiani Island; ask how arrival works at low tide.
- Shamiani Island / south Pemba
- low-key eco stay
From$138per room / nightSee live prices
Live Booking.com hotel map
Find your stay in Pemba Island, Tanzania
Choose your dates to explore nearby hotels, guest feedback and live nightly prices in US dollars.
The map includes other Booking.com properties in the area, not just our shortlist. Prices and availability change with your dates; confirm the final rate and terms before booking. Open the map in a new tab ↗
Our take
Our 5 best Hotels on Pemba Island
Why each stay made the shortlist, and what to check before you book.
Best for remote lagoon retreat: Fundu Lagoon
A secluded lagoon-side resort; check transfer and boat arrangements before booking.
Its remoteness is part of the appeal and a logistics question. Confirm the full transfer, boat timing and what the selected meal plan includes.
Check availabilityBest for north-coast luxury: The Aiyana Resort & Spa
A spacious beachfront resort for a quieter, higher-end island stay.
North-coast resort space comes with a higher price. Check villa category, airport transfer and whether your rate includes meals or activities.
Check availabilityBest for small bay-side retreat: Emerald Bay Resort
A small resort overlooking a sheltered bay in southern Pemba.
A small bay-side property suits a slower island stay. Ask about beach access at different tides and the transfer from Pemba Airport.
Check availabilityBest for north-coast beach base: Pemba Paradise
A beach resort in northern Pemba with pool and gardens.
This is a practical north-coast resort comparison. Check the exact room, meal basis and recent comments about beach and pool conditions.
Check availabilityBest for low-key eco stay: Pemba Eco Lodge
A small, nature-focused lodge on Shamiani Island; ask how arrival works at low tide.
The low-key setting on Shamiani Island is not a conventional resort. Ask about the last part of the transfer and how tides affect arrival.
Check availabilityWhat should you check before booking a Pemba hotel?
Pemba is a separate island from Unguja, with its own airport and longer transfers to some resorts. Confirm flight or ferry arrival, onward transport, meal plan and any boat leg directly with the property.
How we chose
Good ratings, meaningful feedback, useful choice.
Pemba is quieter and more spread out than Unguja. Check the airport transfer, boat connection and exact beach conditions before choosing from this shortlist.
USD amounts are public Booking.com listing examples for two adults checked in October 2026, rounded up to whole dollars. They do not represent a shared travel date or a 90-day minimum. Check the selected room, meals, transfers, taxes and exact dates before paying. All five photos in each gallery show the named property.
Good to know
Pemba Island hotel questions
Which part of Pemba Island is best to stay in?
Makangale in the north suits travellers seeking resort and beach time; southern properties such as Emerald Bay and Pemba Eco Lodge offer a quieter, more remote feel. Check the transfer from Pemba Airport for each address.
Is Pemba Island the same as Pemba in Mozambique?
No. This guide covers Pemba Island in Tanzania’s Zanzibar Archipelago, not the city of Pemba in Mozambique. Check the country and airport before booking flights or accommodation.
Do Pemba Island hotels include airport transfers?
Not automatically. Some stays are remote and may require a road or boat connection. Ask the hotel to confirm pickup, the arrival point, timing and any extra charge in writing.
Are Pemba Island hotels good for diving?
Several hotels can arrange diving or connect guests with operators, but dive sites, certification rules and sea conditions vary. Check the dive centre and equipment separately from the room booking.
What is the difference between Fundu Lagoon and The Aiyana?
Fundu Lagoon is a remote, smaller lagoon-style stay in the south-west. The Aiyana is a larger north-coast beachfront resort. Compare transfer logistics, room plan and facilities for your dates.
How much do hotels on Pemba Island cost?
Prices range widely between eco lodges and luxury resorts. The USD figures here are indicative Booking.com listing examples, not live quotes; check your dates, board basis and transfers for the full cost.
How many nights should I stay on Pemba Island?
A stay of several nights gives room for the journey to the island and at least a full day to explore. If diving or remote beaches matter, allow extra flexibility for weather and boat conditions.